Package index • seatrackRdb

All functions

changeSeatrackPassword(): changeSeatrackPassword

checkMetadata() checkRetrievedMatchDeployed() checkOpenSession() checkLoggers() checkNames(): checkMetadata before import

connectSeatrack(): Connect to seatrack database

deleteActivity(): Delete activity data from the database, based on subselection criteria

deleteFiles(): deleteFiles

deletePostable(): Delete rows from positions.postable

deleteRecords(): Delete records from the database, based on subselection criteria

downloadFiles(): Download files from the file archive

getActiveSessions(): View the active logger sessions

getColonies(): Retrieve info on the registered colonies and locations within colonies in the database

getFileArchiveSummary(): Retrieve summary info on the registered raw-files

getIndividInfo(): Retrieve info on the individuals

getLoggerInfo(): View the view info table

getNames(): Retrieve info on the registered names (people) in the database

getPosdata(): View the postable table

getRecordings(): Read logger recordings data

getRingHistory(): Retrieve info on the ring history table

getSeatrackConnection(): Return ongoing database connection

getSpecies(): Retrieve info on the registered species in the database

getYears(): Retrieve info on the years where we have position data

listFileArchive(): Retrieve info on the status of files in the file archive

loadFile(): Load a single file from the file archive into R

loadPosdata(): Load posdata files into R.

posdata: Example posdata file

pruneRecordings(): pruneRecordings Prune activity, light and temperature recording data that

sampleMetadata: Metadata table for testing purposes

set_credentials_renviron(): Set up SEATRACK DB credentials for this project

sfGmapPlot(): sfGmapPlot

updatePosdataSession(): Manually update the session id link between the postable and the rest of the tables

updateViews(): Manually update the the materialized views of database stats

uploadFiles(): Write files to the file archive

upstartVersion(): Internal functions

viewDatabaseModel(): View the database structure in a browser

writeIndividInfo(): Update the individ_info table

writeLoggerImport(): Update the logger info table

writeMetadata(): Import metadata

writePostable(): Update the positions.postable

writeRecordings(): Update light, temperature or activity data

writeRingHistory(): Update the ring history table